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Overview

This suite of 4 specialized tools supports the complete workflow for Genome-Wide Association Studies (GWAS), from input preparation to result visualization.

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Input Preparation

  • plan_plink_gwas_inputs — Plan and validate GWAS input files
  • generate_gwas_sample_data — Create sample GWAS datasets

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GWAS Analysis

  • run_plink_gwas — Execute PLINK genome-wide study

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Visualization

  • create_manhattan_plot — Generate Manhattan plots